<?xml version="1.0" encoding="UTF-8"?>
<?xml-stylesheet href="/rss.css" type="text/css"?>
<rdf:RDF xmlns="http://purl.org/rss/1.0/"
    xmlns:cc="http://web.resource.org/cc/"
    xmlns:dc="http://purl.org/dc/elements/1.1/"
    xmlns:extra="http://www.w3.org/1999/xhtml"
    xmlns:prism="http://prismstandard.org/namespaces/1.2/basic/"
    xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
    <channel rdf:about="http://www.gutpathogens.com/feeds/latestarticles/journal?quantity=&amp;format=rss&amp;version=">
        <title>Gut Pathogens - Latest Articles</title>
        <link>http://www.gutpathogens.com</link>
        <description>The latest research articles published by Gut Pathogens</description>
        <dc:date>2012-04-25T00:00:00Z</dc:date>
        <items>
            <rdf:Seq>
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/4/1/3" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/4/1/2" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/4/1/1" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/20" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/19" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/18" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/17" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/16" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/15" />
                                <rdf:li rdf:resource="http://www.gutpathogens.com/content/3/1/14" />
                            </rdf:Seq>
        </items>
                 <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </channel>
        <item rdf:about="http://www.gutpathogens.com/content/4/1/3">
        <title>Rapid paracellular transmigration of Campylobacter
jejuni across polarized epithelial cells without
affecting TER: role of proteolytic-active HtrA
cleaving E-cadherin but not fibronectin</title>
        <description>Background:
Campylobacter jejuni is one of the most important bacterial pathogens causing food-borneillness worldwide. Crossing the intestinal epithelial barrier and host cell entry by C. jejuni isconsidered the primary reason of damage to the intestinal tissue, but the molecularmechanisms as well as major bacterial and host cell factors involved in this process are stillwidely unclear.
Results:
In the present study, we characterized the serine protease HtrA (high-temperaturerequirement A) of C. jejuni as a secreted virulence factor with important proteolyticfunctions. Infection studies and in vitro cleavage assays showed that C. jejuni&apos;s HtrA triggersshedding of the extracellular E-cadherin NTF domain (90 kDa) of non-polarised INT-407 andpolarized MKN-28 epithelial cells, but fibronectin was not cleaved as seen for H. pylori&apos;sHtrA. Deletion of the htrA gene in C. jejuni or expression of a protease-deficient S197A pointmutant did not lead to loss of flagella or reduced bacterial motility, but led to severe defectsin E-cadherin cleavage and transmigration of the bacteria across polarized MKN-28 celllayers. Unlike other highly invasive pathogens, transmigration across polarized cells by wildtypeC. jejuni is highly efficient and is achieved within a few minutes of infection.Interestingly, E-cadherin cleavage by C. jejuni occurs in a limited fashion and transmigrationrequired the intact flagella as well as HtrA protease activity, but does not reducetransepithelial electrical resistance (TER) as seen with Salmonella, Shigella, Listeria orNeisseria.
Conclusion:
These results suggest that HtrA-mediated E-cadherin cleavage is involved in rapid crossing ofthe epithelial barrier by C. jejuni via a very specific mechanism using the paracellular route toreach basolateral surfaces, but does not cleave the fibronectin receptor which is necessary forcell entry.</description>
        <link>http://www.gutpathogens.com/content/4/1/3</link>
                <dc:creator>Manja Boehm</dc:creator>
                <dc:creator>Benjamin Hoy</dc:creator>
                <dc:creator>Manfred Rohde</dc:creator>
                <dc:creator>Nicole Tegtmeyer</dc:creator>
                <dc:creator>Kristoffer Bæk</dc:creator>
                <dc:creator>Omar Oyarzabal</dc:creator>
                <dc:creator>Lone Brøndsted</dc:creator>
                <dc:creator>Silja Wessler</dc:creator>
                <dc:creator>Steffen Backert</dc:creator>
                <dc:source>Gut Pathogens 2012, null:3</dc:source>
        <dc:date>2012-04-25T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-4-3</dc:identifier>
                                <prism:require>/content/figures/1757-4749-4-3-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>3</prism:startingPage>
        <prism:publicationDate>2012-04-25T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>PDF</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/4/1/2">
        <title>Use of REP- and ERIC-PCR to reveal genetic heterogeneity of Vibrio cholerae from edible ice in Jakarta, Indonesia</title>
        <description>Background:
Vibrio cholerae is the causative organism of waterborne disease, cholera. V. cholerae has caused many epidemics and pandemics of cholera for many years. In this study, V. cholerae recovered from edible ice were investigated for their genetic diversity using Enterobacterial Repetitive Intergenic Consensus (ERIC) PCR and Repetitive Extragenic Palindromic (REP) PCR. Isolation was done using selective medium and the presumptive isolates were confirmed through biochemical and serological assays.
Results:
Seventy-five isolates of V. cholerae were recovered from ice samples collected from different locations of Jakarta. Specifically, 19 of them were identified as O1 serotype, 16 were Ogawa, 3 isolates were Inaba and the remaining isolates were non-O1. The fingerprinting profiles of V.cholerae isolated from ice samples were very diverse.
Conclusion:
This result showed that the ERIC sequence is more informative and discriminative than REP sequence for analysis of V. cholerae diversity.</description>
        <link>http://www.gutpathogens.com/content/4/1/2</link>
                <dc:creator>Diana Waturangi</dc:creator>
                <dc:creator>Ignasius Joanito</dc:creator>
                <dc:creator>Yogiara .</dc:creator>
                <dc:creator>Sabu Thomas</dc:creator>
                <dc:source>Gut Pathogens 2012, null:2</dc:source>
        <dc:date>2012-03-15T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-4-2</dc:identifier>
                                <prism:require>/content/figures/1757-4749-4-2-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>2</prism:startingPage>
        <prism:publicationDate>2012-03-15T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>PDF</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/4/1/1">
        <title>Health impact of probiotics - vision and opportunities</title>
        <description>Our understanding of the role of the microbiota in our gut and other sites in our body is rapidly emerging and could lead to many new and innovative approaches for health care. The promise of the potential role of probiotics for the prevention and treatment of enteric and other infections as an effective solution needs to be realized. The meeting report summarizes the insights and learning from a recent symposium, &quot;Health Impact of Probiotics - Vision and Opportunities&quot; conducted in Mumbai by the Yakult India Microbiota and Probiotic Science Foundation and P.D. Hinduja National Hospital, Mumbai. The symposium reflected its objective of unraveling the potential role of probiotics for health benefits through presentations and discussions. Experts clearly highlighted the role of probiotics in improving various aspects of health and in immune modulation. The report also captures the debate and discussions on the challenges that are likely to be encountered for the use of probiotics in the country.</description>
        <link>http://www.gutpathogens.com/content/4/1/1</link>
                <dc:creator>Neerja Hajela</dc:creator>
                <dc:creator>Gopinath Balakrish Nair</dc:creator>
                <dc:creator>Philip Abraham</dc:creator>
                <dc:creator>Nirmal Ganguly</dc:creator>
                <dc:source>Gut Pathogens 2012, null:1</dc:source>
        <dc:date>2012-03-12T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-4-1</dc:identifier>
                                <prism:require>/content/figures/1757-4749-4-1-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>1</prism:startingPage>
        <prism:publicationDate>2012-03-12T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/20">
        <title>The Broad Street pump revisited: dairy farms and an ongoing outbreak of inflammatory bowel disease in Forest, Virginia</title>
        <description>We report an ongoing outbreak of ulcerative colitis and Crohn&apos;s disease in Forest, Virginia involving 15 unrelated children and teenagers who resided in close proximity to dairy farms. Some of our cases demonstrated serologic evidence of Mycobacterium avium subspecies paratuberculosis infection, suggesting its potential role as an etiologic agent.</description>
        <link>http://www.gutpathogens.com/content/3/1/20</link>
                <dc:creator>Ellen Pierce</dc:creator>
                <dc:creator>Stephen Borowitz</dc:creator>
                <dc:creator>Saleh Naser</dc:creator>
                <dc:source>Gut Pathogens 2011, null:20</dc:source>
        <dc:date>2011-12-23T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-20</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-20-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>20</prism:startingPage>
        <prism:publicationDate>2011-12-23T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/19">
        <title>Interaction between Mycobacterium tuberculosis, Mycobacterium bovis, Mycobacterium avium subspecies paratuberculosis with the enteric glia and microglial cells.</title>
        <description>Background:
We investigated the interaction of Mycobacterium avium subspecies paratuberculosis, M. bovis and M. tuberculosis and different glial cells (enteric glial and microglial cells) in order to evaluate the infecting ability of these microorganisms and the effects produced on these cells, such as the evaluation of cytokines expression.
Results:
Our experiments demonstrated the adhesion of M. paratuberculosis to the enteroglial cells and the induction of IL-1A and IL-6 expression; M. tuberculosis and M. bovis showed a good adhesive capability to the enteric cell line with the expression of the following cytokines: IL-1A and IL-1B, TNF-&#945;, G-CSF and GM-CSF; M. bovis induced the expression of IL-6 too.The experiment performed with the microglial cells confirmed the results obtained with the enteroglial cells after the infection with M. tuberculosis and M. bovis, whereas M. paratuberculosis stimulated the production of IL-1A and IL-1B.
Conclusion:
Enteroglial and microglial cells, could be the target of pathogenic mycobacteria and, even if present in different locations (Enteric Nervous System and Central Nervous System), show to have similar mechanism of immunomodulation.</description>
        <link>http://www.gutpathogens.com/content/3/1/19</link>
                <dc:creator>Sara Cannas</dc:creator>
                <dc:creator>Paola Molicotti</dc:creator>
                <dc:creator>Alessandra Bua</dc:creator>
                <dc:creator>Donatella Usai</dc:creator>
                <dc:creator>Leonardo Sechi</dc:creator>
                <dc:creator>Antonio Scanu</dc:creator>
                <dc:creator>Elisabetta Blasi</dc:creator>
                <dc:creator>Stefania Zanetti</dc:creator>
                <dc:source>Gut Pathogens 2011, null:19</dc:source>
        <dc:date>2011-12-09T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-19</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-19-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>19</prism:startingPage>
        <prism:publicationDate>2011-12-09T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/18">
        <title>Positive selection on a bacterial oncoprotein associated with gastric cancer</title>
        <description>Background:
Helicobacter pylori is a vertically inherited gut commensal that is carcinogenic if it possesses the cag pathogenicity island (cag PaI); infection with H.pylori is the major risk factor for gastric cancer, the second leading cause of death from cancer worldwide (WHO). The cag PaI locus encodes the cagA gene, whose protein product is injected into stomach epithelial cells via a Type IV secretion system, also encoded by the cag PaI. Once there, the cagA protein binds to various cellular proteins, resulting in dysregulation of cell division and carcinogenesis. For this reason, cagA may be described as an oncoprotein. A clear understanding of the mechanism of action of cagA and its benefit to the bacteria is lacking.
Results:
Here, we reveal that the cagA gene displays strong signatures of positive selection in bacteria isolated from amerindian populations, using the Ka/Ks ratio. Weaker signatures are also detected in the gene from bacteria isolated from asian populations, using the Ka/Ks ratio and the more sensitive branches-sites model of the PAML package. When the cagA gene isolated from amerindian populations was examined in more detail it was found that the region under positive selection contains the EPIYA domains, which are known to modulate the carcinogenicity of the gene. This means that the carcinogenicity modulating region of the gene is undergoing adaptation. The results are discussed in relation to the high incidences of stomach cancer in some latin american and asian populations.
Conclusion:
Positive selection on cagA indicates antagonistic coevolution between host and bacteria, which appears paradoxical given that cagA is detrimental to the human host upon which the bacteria depends. This suggests several non-exclusive possibilities; that gastric cancer has not been a major selective pressure on human populations, that cagA has an undetermined benefit to the human host, or that horizontal transmission of H.pylori between hosts has been more important in the evolution of H.pylori than previously recognized, reducing the selective pressure to lower the pathogenicity of the bacteria. The different patterns of adaptation of the gene in different human populations indicates that there are population specific differences in the human gut environment - due either to differences in host genetics or diet and other lifestyle features.</description>
        <link>http://www.gutpathogens.com/content/3/1/18</link>
                <dc:creator>Gisela Delgado-Rosado</dc:creator>
                <dc:creator>Maria Gloria Dominguez-Bello</dc:creator>
                <dc:creator>Steven Massey</dc:creator>
                <dc:source>Gut Pathogens 2011, null:18</dc:source>
        <dc:date>2011-11-11T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-18</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-18-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>18</prism:startingPage>
        <prism:publicationDate>2011-11-11T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/17">
        <title>No evidence of the Shiga toxin-producing E. coli O104:H4 outbreak strain or enteroaggregative E. coli (EAEC) found in cattle faeces in northern Germany, the hotspot of the 2011 HUS outbreak area</title>
        <description>Background:
Ruminants, in particular bovines, are the primary reservoir of Shiga toxin-producing E. coli (STEC), but whole genome analyses of the current German ESBL-producing O104:H4 outbreak strain of sequence type (ST) 678 showed this strain to be highly similar to enteroaggregative E. coli (EAEC). Strains of the EAEC pathotype are basically adapted to the human host. To clarify whether in contrast to this paradigm, the O104:H4 outbreak strain and/or EAEC may also be able to colonize ruminants, we screened a total of 2.000 colonies from faecal samples of 100 cattle from 34 different farms - all located in the HUS outbreak region of Northern Germany - for genes associated with the O104:H4 HUS outbreak strain (stx2, terD, rfb
O104, fliC
H4), STEC (stx1, stx2, escV), EAEC (pAA, aggR, astA), and ESBL-production (bla
CTX-M, bla
TEM, bla
SHV).
Results:
The faecal samples contained neither the HUS outbreak strain nor any EAEC. As the current outbreak strain belongs to ST678 and displays an en-teroaggregative and ESBL-producing phenotype, we additionally screened selected strains for ST678 as well as the aggregative adhesion pattern in HEp-2 cells. However, we were unable to find any strains belonging to ST678 or showing an aggregative adhesion pattern. A high percentage of animals (28%) shed STEC, corroborating previous knowl-edge and thereby proving the validity of our study. One of the STEC also harboured the LEE pathogenicity island. In addition, eleven animals shed ESBL-producing E. coli.
Conclusions:
While we are aware of the limitations of our survey, our data support the theory, that, in contrast to other Shiga-toxin producing E. coli, cattle are not the reservoir for the O104:H4 outbreak strain or other EAEC, but that the outbreak strain seems to be adapted to humans or might have yet another reservoir, raising new questions about the epidemiology of STEC O104:H4.</description>
        <link>http://www.gutpathogens.com/content/3/1/17</link>
                <dc:creator>Lothar Wieler</dc:creator>
                <dc:creator>Torsten Semmler</dc:creator>
                <dc:creator>Inga Eichhorn</dc:creator>
                <dc:creator>Esther Antao</dc:creator>
                <dc:creator>Bianca Kinnemann</dc:creator>
                <dc:creator>Lutz Geue</dc:creator>
                <dc:creator>Helge Karch</dc:creator>
                <dc:creator>Sebastian Guenther</dc:creator>
                <dc:creator>Astrid Bethe</dc:creator>
                <dc:source>Gut Pathogens 2011, null:17</dc:source>
        <dc:date>2011-11-03T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-17</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-17-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>17</prism:startingPage>
        <prism:publicationDate>2011-11-03T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/16">
        <title>Bacillus Coagulans GBI-30 (BC30) improves Indices of Clostridium difficile-Induced Colitis in Mice
</title>
        <description>Background:
Probiotics have beneficial effects in rodent models of Clostridium difficile (C. diffiicle)-induced colitis. The spore forming probiotic strain Bacillus Coagulans GBI-30, 6086 (BC30) has demonstrated anti-inflammatory and immune-modulating effects in vitro. Our goal was to determine if BC30 improved C. difficile-induced colitis in mice. Starting on study day 0, female C57BL/6 mice were dosed by oro-gastric gavage for 15 days with vehicle (saline) or BC30 (2 &#215; 109 CFU per day). Mice in the C. difficile groups received an antibiotic mixture (study days 5 to 8 in the drinking water), and clindamycin (10 mg/kg, i.p., on study day 10). The C. difficile strain VPI 10463 was given by gavage at 104 CFU to induce colitis on day 11. On day 16, stools and colons were collected for further analyses.
Results:
All mice treated with BC30 survived on study day 13, while two mice treated with vehicle did not survive. On day 12, a significant difference (p = 0.0002) in the percentage of mice with normal stools (66.7%) was found in the BC30/C. difficile group, as compared to the vehicle/C. diffcile group (13.0%). On study day 16, 23.8% of mice treated with BC30 had normal stools, while this value was 0% with vehicle treatment (p value = 0.0187). On this day, the stool consistency score for the BC30/C. difficile group (1.1 &#177; 0.2) was significantly lower (p &lt; 0.05) than for the vehicle/C. difficile cohort (1.9 &#177; 0.2). BC30 modestly attenuated the colonic pathology (crypt damage, edema, leukocyte influx) that was present following C. difficile infection. Colonic MIP-2 chemokine contents (pg/2 cm colon) were: 10.2 &#177; 0.5 (vehicle/no C. difficile), 24.6 &#177; 9.5 (vehicle/C. difficile) and 16.3 &#177; 4.3 (BC30/C. difficle).
Conclusion:
The probiotic BC30 improved some parameters of C. difficile-induced colitis in mice. BC30 prolonged the survival of C. diffiicle infected mice. Particularly, this probiotic improved the stool consistency of mice, in this infectious colitis model.</description>
        <link>http://www.gutpathogens.com/content/3/1/16</link>
                <dc:creator>Leo Fitzpatrick</dc:creator>
                <dc:creator>Jeffrey Small</dc:creator>
                <dc:creator>Wallace Greene</dc:creator>
                <dc:creator>Kelly Karpa</dc:creator>
                <dc:creator>David Keller</dc:creator>
                <dc:source>Gut Pathogens 2011, null:16</dc:source>
        <dc:date>2011-10-20T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-16</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-16-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>16</prism:startingPage>
        <prism:publicationDate>2011-10-20T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/15">
        <title>Comparative analyses of Campylobacter concisus strains reveal the genome of the reference strain BAA-1457 is not representative of the species </title>
        <description>Background:
Several studies have shown that significant genotypic heterogeneity exists among Campylobacter concisus strains. Recently, the genome of C. concisus UNSWCD, isolated from a patient with Crohn&apos;s disease, was sequenced.
Results:
In this study, comparative analyses were performed between strain UNSWCD and BAA-1457, isolated from a patient with acute gastroenteritis. Searches between C. concisus UNSWCD and BAA-1457 showed that 76% of genes were homologues, whereas those between C. jejuni strains showed 90-91% to be homologues, indicating substantial variation exists within these two C. concisus genomes. More specific bidirectional homology searches identified 1593 genes that are shared between these strains, and 115 and 281 genes unique to UNSWCD and BAA-1457, respectively. Significantly, differences in the type of flagellin glycosylation pathways between the two strains were identified and confirmed by PCR. The protein profiles of UNSWCD, BAA-1457 and a further six strains of C. concisus were compared and analyzed bioinformatically, and this differentiated the strains into four clades. BAA-1457 was found to be highly divergent (average similarity: 56.8%) from the other seven strains (mean average similarity &#177; standard deviation: 64.7 &#177; 1.7%). Furthermore, searches for homologues of the 1593 proteins found to be common between UNSWCD and BAA-1457 were conducted against all available bacterial genomes, and 18 proteins were found to be unique to C. concisus, of which 6 were predicted to be secreted, and may represent good markers for detection of this species.
Conclusions:
This study has elucidated several features that may be responsible for the heterogeneity that exists among C. concisus strains, and has determined that the strain BAA-1457 is genetically atypical to other C. concisus strains and is not a good candidate reference strain.</description>
        <link>http://www.gutpathogens.com/content/3/1/15</link>
                <dc:creator>Nadeem Kaakoush</dc:creator>
                <dc:creator>Nandan Deshpande</dc:creator>
                <dc:creator>Marc Wilkins</dc:creator>
                <dc:creator>Mark Raftery</dc:creator>
                <dc:creator>Karolina Janitz</dc:creator>
                <dc:creator>Hazel Mitchell</dc:creator>
                <dc:source>Gut Pathogens 2011, null:15</dc:source>
        <dc:date>2011-10-13T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-15</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-15-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>15</prism:startingPage>
        <prism:publicationDate>2011-10-13T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <item rdf:about="http://www.gutpathogens.com/content/3/1/14">
        <title>Non-therapeutic administration of a model antimicrobial growth promoter modulates intestinal immune responses</title>
        <description>Background:
The development of efficacious alternatives to antimicrobial growth promoters (AGP) in livestock production is an urgent issue, but is hampered by a lack of knowledge regarding the mode of action of AGP. The belief that AGP modulate the intestinal microbiota has become prominent in the literature; however, there is a lack of experimental evidence to support this hypothesis. Using a chlortetracycline-murine-Citrobacter rodentium model, the ability of AGP to modulate the intestinal immune system in mammals was investigated.
Results:
C. rodentium was transformed with the tetracycline resistance gene, tetO, and continuous oral administration of a non-therapeutic dose of chlortetracycline to mice did not affect densities of C. rodentium CFU in feces throughout the experiment or associated with mucosal surfaces in the colon (i.e. at peak and late infection). However, chlortetracycline regulated transcription levels of Th1 and Th17 inflammatory cytokines in a temporal manner in C. rodentium-inoculated mice, and ameliorated weight loss associated with infection. In mice inoculated with C. rodentium, those that received chlortetracycline had less pathologic changes in the distal colon than mice not administered CTC (i.e. relative to untreated mice). Furthermore, chlortetracycline administration at a non-therapeutic dose did not impart either prominent or consistent effects on the colonic microbiota.
Conclusion:
Data support the hypothesis that AGP function by modulating the intestinal immune system in mammals. This finding may facilitate the development of biorationale-based and efficacious alternatives to AGP.</description>
        <link>http://www.gutpathogens.com/content/3/1/14</link>
                <dc:creator>Estela Costa</dc:creator>
                <dc:creator>Richard Uwiera</dc:creator>
                <dc:creator>John Kastelic</dc:creator>
                <dc:creator>L. Brent Selinger</dc:creator>
                <dc:creator>G. Douglas Inglis</dc:creator>
                <dc:source>Gut Pathogens 2011, null:14</dc:source>
        <dc:date>2011-09-25T00:00:00Z</dc:date>
        <dc:identifier>doi:10.1186/1757-4749-3-14</dc:identifier>
                                <prism:require>/content/figures/1757-4749-3-14-toc.gif</prism:require>
                <prism:publicationName>Gut Pathogens</prism:publicationName>
        <prism:issn>1757-4749</prism:issn>
        <prism:volume>${item.volume}</prism:volume>
        <prism:startingPage>14</prism:startingPage>
        <prism:publicationDate>2011-09-25T00:00:00Z</prism:publicationDate>
                <prism:versionidentifier>XML</prism:versionidentifier>
                <cc:license rdf:resource="http://creativecommons.org/licenses/by/2.0/" />
    </item>
        <cc:License rdf:about="http://creativecommons.org/licenses/by/2.0/">
        <cc:permits rdf:resource="http://creativecommons.org/ns#Reproduction" />
        <cc:permits rdf:resource="http://creativecommons.org/ns#Distribution" />
        <cc:permits rdf:resource="http://creativecommons.org/ns#DerivativeWorks" />
    </cc:License>
</rdf:RDF>

